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[modeller_usage] Re: model different regions of a protein
- To: modeller_usage@listsrv.ucsf.edu
- Subject: [modeller_usage] Re: model different regions of a protein
- From: Joel Subach <mjsubach AT alumni.ncsu.edu>
- Date: Tue, 10 Sep 2024 09:55:11 +0200
Hi Jose, thank you for your inquiry and I can assist you in greater detail
if I know how many residues in total you peptide/protein is, thanks:)
On Tue, Sep 10, 2024 at 9:14 AM Modeller Caretaker via modeller_usage <
modeller_usage@listsrv.ucsf.edu> wrote:
> On 9/9/24 4:52 PM, José Xavier via modeller_usage wrote:
> > I'm new here.. so sorry if this is an already answered question.
> >
> > I want to model a protein but the better template doesn't show ~50
> > aminoácids in its sequence. Is it possible to model the protein based on
> > this template and only the region of ~50 residues based on another
> > template?
>
> Yes, this is certainly possible with a suitable alignment; see the FAQ:
> https://salilab.org/modeller/FAQ.html#1
>
> Ben Webb, Modeller Caretaker
> --
> modeller-care@ucsf.edu https://salilab.org/modeller/
> Modeller mail list: https://salilab.org/mailman/listinfo/modeller_usage
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Hi Jose, thank you for your inquiry and I can assist you in greater detail if I know how many residues in total you peptide/protein is, thanks:)