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[modeller_usage] Re: model different regions of a protein
- To: modeller_usage@listsrv.ucsf.edu
- Subject: [modeller_usage] Re: model different regions of a protein
- From: Modeller Caretaker <modeller-care@ucsf.edu>
- Date: Tue, 10 Sep 2024 00:13:35 -0700
On 9/9/24 4:52 PM, José Xavier via modeller_usage wrote:
> I'm new here.. so sorry if this is an already answered question.
>
> I want to model a protein but the better template doesn't show ~50
> aminoácids in its sequence. Is it possible to model the protein based on
> this template and only the region of ~50 residues based on another
> template?
Yes, this is certainly possible with a suitable alignment; see the FAQ:
https://salilab.org/modeller/FAQ.html#1
Ben Webb, Modeller Caretaker
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