[modeller_usage] Re: to model heterodimer protein of mossing residue

[Joel Subach <>]

and your welcome:)

On Fri, Sep 1, 2023 at 9:58 AM Joel Subach <> wrote:

> Hi Arun thank you for your kind update and sure anytime:).
>
> Please let me know where these missing residues are located i.e. are they
> in highly dynamic loop regions?  are they located
> in parts of the protein that are pivotal towards ligand binding etc.?
> (These answers will allow me to guide you into the right direction.)
>
> Best,
> Joel 
>
> On Fri, Sep 1, 2023 at 8:25 AM Arun Dhanasekaran via modeller_usage <
> > wrote:
>
>> My reference pdb contains two chains of different protein, one with 306
>> residues in which 39 residues are missing  and another with 271 residues
>> with 22 residues are missing
>>
>>
>>
>> Thanks a lot  for helping me ……
>>
>>
>>
>> Sent from Mail <https://go.microsoft.com/fwlink/?LinkId=550986> for
>> Windows
>>
>>
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>> 
>> https://salilab.org/mm/postorius/lists/modeller_usage.salilab.org/
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>

and your welcome:)

On Fri, Sep 1, 2023 at 9:58â?¯AM Joel Subach <">> wrote:

Hi Arun thank you for your kind update and sure anytime:).

Please let me know where these missing residues are located i.e. are they in highly dynamic loop regions?  are they located

in parts of the protein that are pivotal towards ligand binding etc.?  (These answers will allow me to guide you into the right direction.)

Best,

Joel ð???

On Fri, Sep 1, 2023 at 8:25â?¯AM Arun Dhanasekaran via modeller_usage <" target="_blank">> wrote:

My reference pdb contains two chains of different protein, one with 306 residues in which 39 residues are missing  and another with 271 residues with 22 residues are missing

 

Thanks a lot  for helping me ��

 

Sent from Mail for Windows

 

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