Re: [modeller_usage] how add sidechains

[Mensur Dlakic <mdlakic AT montana.edu>]

Modeller should be able to do this, but if your intent is to just add 
sidechains and not change backbone at all, I would suggest SCWRL:

http://dunbrack.fccc.edu/SCWRL3.php

Other useful servers:

http://bioserv.rpbs.jussieu.fr/cgi-bin/SCit
http://eudoxus.scs.uiuc.edu/r3.html
http://irecs.bioinf.mpi-inf.mpg.de/


At 03:45 AM 5/28/2008, matziast AT med.uth.gr wrote:
> Hi,
> I have a problem with the model building. Specifically, I have the coordinates
> of the backbone and I want to add its sidechains but I can't find the
> appropriate script. If someone knows the name of the script, tell me.
> Thank you in advance,
> Maria.
> _______________________________________________
> modeller_usage mailing list
> modeller_usage@listsrv.ucsf.edu
> https://salilab.org/mailman/listinfo/modeller_usage

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| Mensur Dlakic, PhD                | Tel: (406) 994-6576                |
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