refinement of initial structure

[Derek Smith <derek AT yorvic.york.ac.uk>]

Dear Modellers,

I have a manually constructed model and I would like to use the MODELLER
optimisation protocol. I have attempted to follow the FAQ question 12,
but I find that although MODELLER reads in the 'model.ini' file I give
it, it then extracts restraints from the templates to refine the model.

Is there a way of presenting MODELLER with a model (minus any other
details) and using the program purely as a structure refinement tool?

Any help would be appreciated,

Derek Smith

-- 
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Derek Smith                   	phone:   (01904) 432550
Structural Biology Laboratory   email:   derek AT yorvic.york.ac.uk
Department of Chemistry     	  fax:   (01904) 410519	
University of York, Heslington, York. YO10 5DD United Kingdom.
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