Dear Modellers
I have a manually constructed model protein, which I would like to refine
using the MODELLER default schedule. I have attempted this using the protocol
based on question 12 in the MODELLER FAQ. However, I find that MODELLER reads
the model.ini file, and then extracts restraints from the templates, which
are then used in the optimization of the model. I would like to refine my
model based only upon my initial conformation. Is this possible do do, and if
so, how should I go about it?
Thanks in advance,
Derek Smith.
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Derek Smith phone: (01904) 432550
Structural Biology Laboratory email:
Department of Chemistry fax: (01904) 410519
University of York, Heslington, York. YO10 5DD United Kingdom.
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