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Including water molecules, HETATM
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Automated comparative modeling with
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Simple usage
Contents
Index
More advanced usage
Subsections
Including water molecules, HETATM residues, and hydrogen atoms
Changing the default optimization and refinement protocol
Getting a very fast and approximate model
Building a model from multiple templates
Building an all hydrogen model
Refining only part of the model
Including disulfide bridges
Generating new-style PDBx/mmCIF outputs
Providing your own restraints file
Using your own initial model
Adding additional restraints to the defaults
Building multi-chain models
Residues and chains in multi-chain models
Accessing output data after modeling is complete
Fully automated alignment and modeling
