Hi all, I'm using Modeller6 for the first time. I want to model a protein on a template but the program exit with this error in standard output: ---- /usr/local/bin/modeller6v1/bin/mod6v1: line 41: 10321 Segmentation fault (core dumped) $NICE ${EXECUTABLE} $STEERF >$LOGF ---- i'm using a Linux (RedHat) workstation with a Pentium4 and 512 MB RAM. regards, Francesco -- ------------------------------------------------------- Francesco Musiani --- PhD Student Web page: http://orion.agrsci.unibo.it/muso mail: musiani@sissa.it --- fmusiani@agrsci.unibo.it ------------------------------------------------------- Stelle già dal tramonto si contendono il cielo a frotte Luci meticolose nell'insegnarti la notte [F. DeAndre' - Il ritorno di Giuseppe]
Hi, Are you sure you set the stack size to unlimited? ulimit -S unlimited (under bash) limit stacksize unlimited (tcsh) Yours Björn -- Björn Wallner Stockholm Bioinformatics Center PhD Student SCFAB, Stockholm University bjorn@sbc.su.se S-106 91 Stockholm Tel:+46-8-553 785 66 Fax:+46-8-5537 8214 Cell:070-521 56 65
Hi, In addition to what Björn mentioned I would check what's in the .cshrc file (or .bashrc, depending on your shell), since limit should already be set there to unlimited. Thanks, Bozidar -----Original Message----- From: owner-modeller_usage@salilab.org [mailto:owner-modeller_usage@salilab.org] On Behalf Of Björn Wallner Sent: Thursday, February 28, 2002 10:03 AM To: Francesco Musiani Cc: modeller_usage@salilab.org Subject: Re: memory failure Hi, Are you sure you set the stack size to unlimited? ulimit -S unlimited (under bash) limit stacksize unlimited (tcsh) Yours Björn -- Björn Wallner Stockholm Bioinformatics Center PhD Student SCFAB, Stockholm University bjorn@sbc.su.se S-106 91 Stockholm Tel:+46-8-553 785 66 Fax:+46-8-5537 8214 Cell:070-521 56 65
participants (3)
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Björn Wallner -
Bozidar -
Francesco Musiani