Hi, I am very new to modeller so a small query, Please let me know how do I compare the template sequences using compare script. Do I need to download individual template files from PDB or Is there any other possible way. Also, whta should be done in case I have too many template sequences with same e -value (e.g. 0 e -value) should i download all of them?? Thanks and Regards.
On 8/7/12 5:08 AM, Nanda Pandey wrote: > I am very new to modeller so a small query, Please let me know how do I > compare the template sequences using compare script. Do I need to > download individual template files from PDB Yes, you will need to download template PDB files. > Also, whta should be done in case I have too many template > sequences with same e -value (e.g. 0 e -value) should i download all of > them?? You can if you like - how you choose which template(s) to use for modeling is up to you. Ben Webb, Modeller Caretaker -- modeller-care@salilab.org http://www.salilab.org/modeller/ Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage
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Modeller Caretaker -
Nanda Pandey