Re: [modeller_usage] Mutations

laura.buttazzo@email.it wrote: > I'm a new user of Modeller and I have a question about the model computing. > If I take one/or more models with a given alignment and I change just one or > more amino acids maintaning the same alignment, should I obtain a different > model? > In other words, Can Modeller be used for calculating mutations?

Certainly - there has been some work done for SNPs using Modeller; see http://salilab.org/modeller/wiki/Mutate_model for an example script.

Ben Webb, Modeller Caretaker