Hey everyone, would moving the subgroup meeting forward by two hours (12:00 PST) work for you, so we can accommodate Jeff's request?
Let me know.
- Jared
---------- Forwarded message --------- From: Hoch,Jeffrey hoch@uchc.edu Date: Wed, Jun 21, 2023 at 12:20 PM Subject: Re: Next meeting agenda To: Jared Sagendorf jared.sagendorf@rcsb.org Cc: Pustovalova,Yulia ypustovalova@uchc.edu, Eghbalnia,Hamid R. < heghbalnia@uchc.edu>, Pozhidaeva,Alexandra pozhidaeva@uchc.edu, Courtney,Joseph M. jcourtney@uchc.edu, Gryk,Michael R. gryk@uchc.edu
Hi Jared – met too! I added a term to the dictionary . Yulia, Michael and I will be driving back from a Gordon Conference in Vermont Friday morning, and it might be tight for us to make the schedule time. I know there are many schedules to check, but would it be possible to bump the time back a couple of hours to take some of the stress out? -Jeff
PS – good news is that we heard BMRB will be funded via an R24 mechanism. Don’t know the budget yet, though.
*From: *Jared Sagendorf jared.sagendorf@rcsb.org *Date: *Wednesday, June 21, 2023 at 2:08 PM *To: *"Hoch,Jeffrey" hoch@uchc.edu *Subject: *Next meeting agenda
*** Attention: This is an external email. Use caution responding, opening attachments or clicking on links. ***
Hi Jeff, looking forward to the next meeting!
For the agenda this week, I was thinking we could start with having a look at some of the terminology, now that we have a dictionary in place. I'll put together a few slides that I hope will explain the way the Sali group speaks about modeling, and we can identify if there's any inconsistencies between the two groups.
Aside from that, I thought it would be good to begin a discussion on what the current hurdles are to actually implementing a fully Bayesian validation pipeline for the PDB. What are the unsolved problems or unimplemented steps that are missing to actually push this forward, and could we work together to start solving those issues?
Also happy to send out any items you would like to bring up!
- Jared
Works for me.
On Wed, Jun 21, 2023 at 12:44 PM Jared Sagendorf jared.sagendorf@rcsb.org wrote:
> Hey everyone, would moving the subgroup meeting forward by two hours > (12:00 PST) work for you, so we can accommodate Jeff's request? > > Let me know. > > - Jared > > ---------- Forwarded message --------- > From: Hoch,Jeffrey hoch@uchc.edu > Date: Wed, Jun 21, 2023 at 12:20 PM > Subject: Re: Next meeting agenda > To: Jared Sagendorf jared.sagendorf@rcsb.org > Cc: Pustovalova,Yulia ypustovalova@uchc.edu, Eghbalnia,Hamid R. < > heghbalnia@uchc.edu>, Pozhidaeva,Alexandra pozhidaeva@uchc.edu, > Courtney,Joseph M. jcourtney@uchc.edu, Gryk,Michael R. gryk@uchc.edu > > > Hi Jared – met too! I added a term to the dictionary . Yulia, Michael > and I will be driving back from a Gordon Conference in Vermont Friday > morning, and it might be tight for us to make the schedule time. I know > there are many schedules to check, but would it be possible to bump the > time back a couple of hours to take some of the stress out? -Jeff > > > > PS – good news is that we heard BMRB will be funded via an R24 mechanism. > Don’t know the budget yet, though. > > > > *From: *Jared Sagendorf jared.sagendorf@rcsb.org > *Date: *Wednesday, June 21, 2023 at 2:08 PM > *To: *"Hoch,Jeffrey" hoch@uchc.edu > *Subject: *Next meeting agenda > > > > *** Attention: This is an external email. Use caution responding, opening > attachments or clicking on links. *** > > Hi Jeff, looking forward to the next meeting! > > For the agenda this week, I was thinking we could start with having a look > at some of the terminology, now that we have a dictionary in place. I'll > put together a few slides that I hope will explain the way the Sali group > speaks about modeling, and we can identify if there's any inconsistencies > between the two groups. > > Aside from that, I thought it would be good to begin a discussion on what > the current hurdles are to actually implementing a fully Bayesian > validation pipeline for the PDB. What are the unsolved problems or > unimplemented steps that are missing to actually push this forward, and > could we work together to start solving those issues? > > Also happy to send out any items you would like to bring up! > > > > - Jared > _______________________________________________ > Bayesian validation mailing list > bayesian_validation@salilab.org > https://salilab.org/mm/postorius/lists/bayesian_validation.salilab.org/
works for me too.
Regards, Arthur
On Wed, Jun 21, 2023 at 1:15 PM Neelesh Soni neeleshsoni03@gmail.com wrote: > > Works for me. > > On Wed, Jun 21, 2023 at 12:44 PM Jared Sagendorf jared.sagendorf@rcsb.org wrote: >> >> Hey everyone, would moving the subgroup meeting forward by two hours (12:00 PST) work for you, so we can accommodate Jeff's request? >> >> Let me know. >> >> - Jared >> >> ---------- Forwarded message --------- >> From: Hoch,Jeffrey hoch@uchc.edu >> Date: Wed, Jun 21, 2023 at 12:20 PM >> Subject: Re: Next meeting agenda >> To: Jared Sagendorf jared.sagendorf@rcsb.org >> Cc: Pustovalova,Yulia ypustovalova@uchc.edu, Eghbalnia,Hamid R. heghbalnia@uchc.edu, Pozhidaeva,Alexandra pozhidaeva@uchc.edu, Courtney,Joseph M. jcourtney@uchc.edu, Gryk,Michael R. gryk@uchc.edu >> >> >> Hi Jared – met too! I added a term to the dictionary . Yulia, Michael and I will be driving back from a Gordon Conference in Vermont Friday morning, and it might be tight for us to make the schedule time. I know there are many schedules to check, but would it be possible to bump the time back a couple of hours to take some of the stress out? -Jeff >> >> >> >> PS – good news is that we heard BMRB will be funded via an R24 mechanism. Don’t know the budget yet, though. >> >> >> >> From: Jared Sagendorf jared.sagendorf@rcsb.org >> Date: Wednesday, June 21, 2023 at 2:08 PM >> To: "Hoch,Jeffrey" hoch@uchc.edu >> Subject: Next meeting agenda >> >> >> >> *** Attention: This is an external email. Use caution responding, opening attachments or clicking on links. *** >> >> Hi Jeff, looking forward to the next meeting! >> >> For the agenda this week, I was thinking we could start with having a look at some of the terminology, now that we have a dictionary in place. I'll put together a few slides that I hope will explain the way the Sali group speaks about modeling, and we can identify if there's any inconsistencies between the two groups. >> >> Aside from that, I thought it would be good to begin a discussion on what the current hurdles are to actually implementing a fully Bayesian validation pipeline for the PDB. What are the unsolved problems or unimplemented steps that are missing to actually push this forward, and could we work together to start solving those issues? >> >> Also happy to send out any items you would like to bring up! >> >> >> >> - Jared >> >> _______________________________________________ >> Bayesian validation mailing list >> bayesian_validation@salilab.org >> https://salilab.org/mm/postorius/lists/bayesian_validation.salilab.org/ > > > > -- > Neelesh Soni > Postdoctoral Scholar > Department of Bioengineering and Therapeutic Sciences > University of California, San Francisco, USA > _______________________________________________ > Bayesian validation mailing list > bayesian_validation@salilab.org > https://salilab.org/mm/postorius/lists/bayesian_validation.salilab.org/
participants (3)
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Arthur Zalevsky
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Jared Sagendorf
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Neelesh Soni