Bayesian validation

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bayesian_validation@salilab.org

May 2023

1 participants
2 discussions

Meeting with Jeff Hoch's group moved to June 2nd
by Jared Sagendorf 22 May '23

22 May '23

Hi all, there was a schedule conflict on Jeff's end so we are moving the first meeting with his group to Friday June 2nd at 10:00 AM PST. This is outside our normal bi-weekly schedule, so apologies if this creates new time conflicts on our end! I'd like to keep this week's regularly scheduled meeting however, and I was thinking an overview of some current (probably non-Bayesian) methods for model or data validation would be useful. Would anyone like to volunteer to present some of their past or current work on model or data validation? Or perhaps review what is currently being done in the PDB/BMRB/EMDB? For any non-Bayesian methods, a discussion could then follow of what would be possible with a Bayesian approach, and any related trade-offs. Let me know if you can present some material! Otherwise I'll pester people individually - Jared

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Subgroup Meeting tomorrow
by Jared Sagendorf 11 May '23

11 May '23

Hi everyone, just a reminder that we're meeting tomorrow at 10AM PST. I put together some slides/ipython notebook with a brief, high-level overview of Bayesian inference and I'll review the following paper: https://dx.doi.org/10.1021/acs.jpca.0c05026 which I chose because I found it a nice application of Bayesian methods in a setting that is close to our work, but perhaps something most people are less familiar with (me especially). I created a shared google drive so we can all share materials from these meetings, but I wasn't able to invite people with non-gmail e-mails so let me know if you want access and I'll try to figure it out. In addition we can discuss any agenda we'd like to set for the first meeting with Jeff Hoch's group, which will be on the 26th of May. Looking forward to the discussion! - Jared

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