[modeller_usage] Re: Loop Refining Multiple Model Failure Inquiry
To:
Subject: [modeller_usage] Re: Loop Refining Multiple Model Failure Inquiry
From: Modeller Caretaker <>
Date: Tue, 04 Oct 2022 13:56:51 -0700
On 9/28/22 4:55 AM, Joel Subach via modeller_usage wrote:
> for the above topic I can not seem to generate more than 1-model, although
> my script indicates 500 models. I have tried using refine.very_fast and
> refine.slow and moreover tried with different residue amounts for my
> heptamer ranging from 84 residues (12/chain) up to 126
> residues (18/chain). Maybe I can only encode up to
> 12 residues in total per script?
There are no limits imposed by Modeller on the number of models you
generate or the length of loops. It just runs in a simple for loop from
LoopModel.loop.starting_model to LoopModel.loop.ending_model. If it's
only building one model, you must have set one or both of these incorrectly.
Ben Webb, Modeller Caretaker
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