Re: [modeller_usage] Modeller produces primary structure only
To: Danilo Boskovic <>,
Subject: Re: [modeller_usage] Modeller produces primary structure only
From: Modeller Caretaker <>
Date: Fri, 3 Jan 2020 00:00:23 -0800
On 12/29/19 7:50 AM, Danilo Boskovic wrote:
sorry, forgot to put the second template in the knowns.
Note also that you selected ~150 residues for loop refinement. This is
unlikely to work - the conformational space is just too large. We
typically don't recommend loop refinement for more than 15-20 residues.