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Re: [modeller_usage] python script error

On 5/30/19 2:13 PM, Bruno Cramer wrote:

bcramer@schrodinger:~/workdir-modeller9.1$ python runmodeller-test1.py
   File "runmodeller-test1.py", line 13
    a = automodel(env, alnfile = ’alinha.pir’, knowns = ’4hpg’, sequence = ’bgl’) 
                                  ^
SyntaxError: invalid syntax
This isn't a Modeller issue. Python expects its scripts to be plain text. Use a regular quote character (' not ’) for your strings here (you use the right one when you set atom_files_directory above). 

	Ben Webb, Modeller Caretaker
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             https://salilab.org/modeller/
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