Thanks for your answer. Looking to the alignment and model, the region
have low identity but the alignment is sound. I am not see any
evident/obvious problem
with alignment or steric clashes. Let me rephrase the question: it is
possible to increase the weight of such restrains on a particular region ?
Mario
On 3/28/18 6:14 PM, Modeller Caretaker wrote:
On 3/28/18 8:35 AM, Mario A Bianchet wrote:
It is not clear (or I am missing it ) if is possible restrains
between model and template.
It isn't necessary to define restraints to the template, since
Modeller does that automatically. If your model is deviating from the
template, then you either have a lack of restraint in that region
(generally due to a poor alignment, such as a gap) or you have some
sort of restraint conflict (e.g. multiple conflicting templates, or
steric clash).
Ben Webb, Modeller Caretaker
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Mario A. Bianchet, Ph.D. |
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