[modeller_usage] Need some example and commend arguments for (selection.extend_by_residue())
To:
Subject: [modeller_usage] Need some example and commend arguments for (selection.extend_by_residue())
From: "Mahesh Velusamy" <>
Date: Thu, 23 Jun 2016 20:07:51 +0530 (IST)
Cc: ,
Dear All,
If anyone knows how to use this two commends . Could you tell me the
arguments to pass and some example which would be really helpful.
selection.extend_by_residue() -- extend selection by residue
selection.by_residue() -- make sure all residues are fully selected
For example:
I selected particular region of atoms for optimization following this
commend:
sI=selection(mdl1.atoms['CA:'+respos+':'+chain].select_sphere(10))
Then , I selected the residues which has single atom in selction through
this commend.
s = sI.extend_by_residue(pick_hot_cutoff=12)
And , I want to do the same with selection.extend_by_residue() but I got
stuck with arguments for this commend.
Thanking you in advance