Re: [modeller_usage] (no subject)

[Modeller Caretaker <modeller-care@ucsf.edu>]

On 3/17/14, 9:57 PM, Ankita Nagpal wrote:
> I have just started using modeller with the help of tutorial example.In
> the aligning step when iam aligning 1bdm with TvLDH IAM getting error
> only 317 residue out of 318 contain atom of type CA .

That's not an error, it's a warning. It means exactly what it says - one 
of your residues doesn't have a CA (C-alpha) atom in it. If your 
residues are all supposed to be amino acids, this can be an indication 
of a problem. But if you have a ligand in there, most likely it won't 
have a CA atom so all is fine.

	Ben Webb, Modeller Caretaker
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