[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [modeller_usage] Problem importing modeller and _modeller modules

On 10/18/13 9:04 PM, Gustavo Machado Alvares de Lima wrote:

Hi Ben,

I installed the .deb package 64bit, but for some reason it couldn't set
pythonpaths correctly. I could solve the problem by adding to paths to
pythonpath as you said, as follows:

export PYTHONPATH='$PYTHONPATH:/usr/lib/modeller9.12/lib/x86_64-intel8''
export PYTHONPATH='$PYTHONPATH:/usr/lib/modeller9.12/modlib/''

And that solved import problems, but a python problem (listed as bug
since python 2.6) showed up:

undefined symbol: Py_InitModule4
Sounds like you're trying to load the Python 2.3 extension into a newer Python - that won't work (but isn't a Python bug - they just changed the interface between 2.4 and 2.5). Trying adding /usr/lib/modeller9.12/lib/x86_64-intel8/python2.5/ to your PYTHONPATH instead. 

BTW, what is the default value of sys.path on your system Python?

	Ben Webb, Modeller Caretaker
--
             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage