Re: [modeller_usage] modeller 9.11 and Ubuntu 12.04 installation

[Mike WA8BXN <>]

Thank you very much for your prompt reply! Those two links did indeed fix
there particular problem I was running into. I am using a desktop 64 bit
Ubuntu 12.04 (dual boot along with Windows 7). 
 
 
 
 
-------Original Message------- 
 
From: Modeller Caretaker 
Date: 09/28/12 13:53:21 
To: Mike WA8BXN 
Cc:  
Subject: Re: [modeller_usage] modeller 9.11 and Ubuntu 12.04 installation 
 
On 9/27/12 8:11 PM, Mike WA8BXN wrote: 
> I have tried variations of the ln commands shown in the installation guide

> for Ubuntu 8 substituting 2.7 for the python version but still get the
error 
> message when trying to run the samples with command lines beginning with 
> mod9.11 or python followed by the sample script file name. 
 
Are you running the 32-bit or 64-bit version, desktop or server? 
 
I just tried the 64-bit desktop version of Ubuntu 12.04 and mod9.11 
works fine (it gives a warning about 'import site' but this is normal, 
as discussed in the FAQ). What (exactly) does it do on your system? 
"python" didn't work for me, since the Ubuntu folks seem to have moved 
things around since Ubuntu 10; now there is no /usr/lib64/ directory 
(which is where Modeller puts its Python extensions). I fixed this 
pretty easily by symlinking the extensions into /usr/lib/ with 
 
sudo ln -s /usr/lib64/python2.7/dist-packages/modeller \ 
/usr/lib/python2.7/dist-packages/ 
 
sudo ln -s /usr/lib64/python2.7/dist-packages/_modeller.so \ 
/usr/lib/python2.7/dist-packages/ 
 
If this is your experience also, and those links fix things for you, let 
me know and I'll update the release notes accordingly. 
 
On the 32-bit desktop version of Ubuntu 12.04, everything works fine for me.

 
Ben Webb, Modeller Caretaker 
-- 
 http://www.salilab.org/modeller/ 
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage 
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