Subject: Re: [modeller_usage] ALIGN_CODES(i) error, Again
From: Robert Campbell <>
Date: Mon, 19 Mar 2012 19:40:06 -0400
Hello,
On Mon, 19 Mar 2012 19:08:43 -0400, "Zumot, Elia Nabil" <> wrote:
> Hello Modeller people,
>
> I realize this error has been posted repeatedly and I have tried to check
> for all possible solutions mentioned but I still can't do it right. My
> alignment filename is 2nwx_ASCT.ali and my pdb filename is
> 2nwx_A.pdb so the names and letter cases match exactly.
>
> The error I'm getting is:
> ModellerError: read_al_373E> Protein specified in ALIGN_CODES(i) was not
> found in the alignment file; ALIGN_CODES( 2) = ASCT
I think your error is in the first line of your entry for ASCT. You have:
>P2;ASCT
when it should be:
>P1;ASCT
Cheers,
Rob
--
Robert L. Campbell, Ph.D.
Senior Research Associate/Adjunct Assistant Professor
Dept. of Biomedical & Molecular Sciences, Botterell Hall Rm 644
Queen's University,
Kingston, ON K7L 3N6 Canada
Tel: 613-533-6821
<> http://pldserver1.biochem.queensu.ca/~rlc