[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
Re: [modeller_usage] Fw: mutation error
- To: leuven <leuven AT yeah.net>
- Subject: Re: [modeller_usage] Fw: mutation error
- From: Modeller Caretaker <modeller-care@ucsf.edu>
- Date: Tue, 23 Mar 2010 11:03:08 -0700
- Cc: modeller_usage <modeller_usage@listsrv.ucsf.edu>
On 03/23/2010 01:15 AM, leuven wrote:
I try to make mutation model by this scrips:
http://salilab.org/modeller/wiki/Mutate%20model
When I typed command in terminal: py2 1-nh-active.pdb 97 VAL
A>mute-native.log
It is said:
* ATOM 1 CB THR A 1 57.352 108.506 46.727 1.00 21.29 A
^
SyntaxError: invalid syntax*
I don't know where is the mistake.
You're telling Python to "run" your PDB file, and it's complaining
because (obviously) a PDB file is not a valid Python script. If you look
closely at the wiki page you referenced above, you'll notice you have to
put the name of the Python script before the name of the PDB file.
Ben Webb, Modeller Caretaker
--
modeller-care@ucsf.edu http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage