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Re: [modeller_usage] special restrains for aromatic packing interactions

To: Thomas Evangelidis <>
Subject: Re: [modeller_usage] special restrains for aromatic packing interactions
From: Modeller Caretaker <>
Date: Wed, 03 Mar 2010 07:51:37 -0800
Cc:

On 3/2/10 11:19 AM, Thomas Evangelidis wrote:

With respect to my second question, how long do you advice me to set the
distance between 2 atoms that are supposed to form an H-bond?

We use 3.5A in our own code, but I recommend you try somereasonable-looking values and look at your results for artifacts.


	Ben Webb, Modeller Caretaker
--
             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage

References:
- [modeller_usage] special restrains for aromatic packing interactions
  - From: Thomas Evangelidis <>
- Re: [modeller_usage] special restrains for aromatic packing interactions
  - From: Modeller Caretaker <>
- Re: [modeller_usage] special restrains for aromatic packing interactions
  - From: Thomas Evangelidis <>

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