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[modeller_usage] model_comparison
- To: modeller_usage@listsrv.ucsf.edu
- Subject: [modeller_usage] model_comparison
- From: Prasenjit Mukherjee <mukherjeepr AT yahoo.com>
- Date: Sat, 15 Sep 2007 19:39:07 -0700 (PDT)
Hello Modeler users,
I have a question for you. I have generated models for a sequence using one structural homologue. In one set i have used 1 crystal structure of the reference protein and generated 10 models. In the second set i have used two crystal structures of the same reference protein and generated 10 models.The sequence alignment is the same in both cases. My question is, can i compare the pdf violations of a model generated in set 1 with a model generated in set 2 ?
Thank you
Prasenjit K Mukherjee
Graduate student
Department of Medicinal Chemistry
School of Pharmacy
University of Mississippi
Cell - 662 380 0146
Office - 662 915 1286
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