I'm wanting to add in an ATP molecule based on my template to my
modelled structure. I have looked at the FAQ and it does seem a
laborious task to write the CHARM topology files etc. I was wondering if
there was a database of ligands (wiki? type thing) or a web based
converter ( i have already looked at Prodrg in dundee) or if someone
wants to share their top files for ATP.
...Or any alternative methods out there?
I'm currently using 8v2 but with old scripts and will upgrade soon.
Cheers
joel
--
Joel Tyndall, PhD
Lecturer
National School of Pharmacy
University of Otago
PO Box 913 Dunedin 9054
New Zealand
Pukenga
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Te Whare Wananga o Otago
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Aotearoa