Re: [modeller_usage] cyclic peptide modeling

[Modeller Caretaker <modeller-care@ucsf.edu>]

Giacomo Bastianelli wrote:
> I tried as you suggested, however I cannot have the
> cyclic form of my protein.

That doesn't give me much information to go on, but if you send me your 
input files, I can take a look.

> I tried also writing differently the IDs ('1' or '1:' or '1:A')..

The example I sent you works, although obviously if your C terminus is 
not at residue number 54, you'll have to change that. The N terminus 
should always be 1, unless you have done something very unusual.

	Ben Webb, Modeller Caretaker
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