Subject: Re: [modeller_usage] Questions on loop modelling
From: Modeller Caretaker <>
Date: Fri, 16 Jun 2006 15:15:35 -0700
Cc:
Modeller Caretaker wrote:
hori koshii wrote:
3. When we generate loop models, do you model one loop and then the
other?
That depends on how close the loops are in space. If they are far apart,
you can certainly model them both at once.
Oops, I actually meant:
If the two loops are close together, you certainly _should_ model them
both at once. If they are far apart, you can model them together or
separately, but you should certainly treat the two loops separately when
you assess and rank them - a good model for one loop does not
necessarily mean a good model for the other, in this case.