[modeller_usage] GA341/DOPE/MolPDF which one for model selection?
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Subject: [modeller_usage] GA341/DOPE/MolPDF which one for model selection?
From: Yun He <>
Date: Mon, 22 May 2006 17:58:19 +0800
Organization: Institute of Biophysics Chinese Academy of Sciences
Reply-to:
Hi, everybody,
Currently, I am working on a model based on a very low sequence-identity
template (about 13%). I use an alignment to produce 30 models, and then I
sort these models by their molpdf or GA341 or DOPE. However, the sorts turn
out very different results, some models with higher GA341 scores takes higher
DOPE scores. I am confused, which one should I choose?
Jarod