Re: [modeller_usage] modeller ga341 score

[Modeller Caretaker <modeller-care@ucsf.edu>]

jo hanna wrote:
> Okay I have calculated the DOPE scores and I will use these. Just out of 
> interest, is there are way of utilising the Z scores or compactness 
> scores from GA341? From the example below I am assuming that the lower 
> the Z score the better, would this be correct? Also when it comes to the 
> compactness value is a higher or lower score better?

Please refer to the GA341 paper 
(http://salilab.org/pdf/090_MeloProteinScience2002.pdf) and the MOULDER 
paper (http://salilab.org/pdf/123_JohnNAR2003.pdf) for more information.

	Ben Webb, Modeller Caretaker
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