As I tough, the script and modeling run nicely on my pc computer, but on the alpha machine with unix I got that error message.
Perhaps it can be due that modifications that you made to able modeller run o Tru64 system.
Can you check it from there ?!
Ricardo Nicoluci wrote: > But is modeller who is generating this file adsl.B99990001.pdb. I > couldnt find any parameter to set this file name. > I just need three files: the script file (mod.py), the align file (
> align.ali) and the template structure (1c3c.pdb) > The PDB named adsl.B99990001.pdb that modeller cant find is a pdb file > generated by it own. as far as I know, modeller generates the models > using first the sequence name a putting after it the code
B99990001.pdb > for the first structure, B99990002.pdb to the second and so on. > Modeller generates initials files, but not this one that he couldnt find.
If you send me your input files, I may be able to reproduce the problem
here.