SUPPORT: Re: Force constant

[Andras Fiser <andras AT tuba.rockefeller.edu>]

Paolo,


Well, it should work. How does your top file look like? You need to include it
as a special_retsraints subroutine if you use a default top file like FAQ 7 in
the manual.

Andras

Paolo Daniele wrote:
> 
> MIME-Version: 1.0
> Content-Type: text/plain; charset=iso-8859-1
> Content-Transfer-Encoding: 8bit
> 
> Hi,
> I'd like to build 5 models of my protein
> with a b-strand in a specific region.
> After doing the VTFM optimization the b-strand
> disappears in all the models.
> How can I do to mantain this b-strand?
> I'd like to apply a force costant on the C-alpha
> carbons in that region while refinining the 5 models,
> the "MAKE_RESTRAINTS RESTRAINT_TYPE = 'STRAND'"
> command didn't work!!
> Thanks in advance for your help.
> Best regards,
> Paolo Daniele
> 
> ____________________________________________________________
> Nokia 5510 insolito ma geniale.
> Vai a http://it.promotions.yahoo.com/nokia/
> scoprilo e vincilo. Il concorso termina il 16 dicembre 2001.

-- 
    ,
Andras Fiser, PhD            # phone: (212) 327 7216
The Rockefeller University   # fax:   (212) 327 7540 
Box 270, 1230 York Avenue    # e-mail:fisera AT rockefeller.edu
New York, NY 10021-6399, USA # http://salilab.org/~andras